Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccnb1ip1D3Z3K2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.03□□□□□ -0.48
Ccnb1ip1D3Z3K2 Daam2-202ENSMUST00000224595 1926 ntBASIC12.03□□□□□ -0.48
Ccnb1ip1D3Z3K2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccnb1ip1D3Z3K2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccnb1ip1D3Z3K2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccnb1ip1D3Z3K2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccnb1ip1D3Z3K2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.03□□□□□ -0.48
Ccnb1ip1D3Z3K2 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.02□□□□□ -0.48
Ccnb1ip1D3Z3K2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.02□□□□□ -0.48
Ccnb1ip1D3Z3K2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ccnb1ip1D3Z3K2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccnb1ip1D3Z3K2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccnb1ip1D3Z3K2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccnb1ip1D3Z3K2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccnb1ip1D3Z3K2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccnb1ip1D3Z3K2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ccnb1ip1D3Z3K2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccnb1ip1D3Z3K2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccnb1ip1D3Z3K2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccnb1ip1D3Z3K2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Gm27357-201ENSMUST00000183754 135 ntBASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccnb1ip1D3Z3K2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Gm15483-201ENSMUST00000120338 456 ntBASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Gm27920-201ENSMUST00000183953 96 ntBASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccnb1ip1D3Z3K2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms