Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.11□□□□□ -0.47
Gm3543D3Z235 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.1□□□□□ -0.47
Gm3543D3Z235 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm3543D3Z235 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.1□□□□□ -0.47
Gm3543D3Z235 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.1□□□□□ -0.47
Gm3543D3Z235 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.1□□□□□ -0.47
Gm3543D3Z235 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Gm3543D3Z235 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3543D3Z235 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Gm12485-201ENSMUST00000119641 291 ntBASIC12.09□□□□□ -0.47
Gm3543D3Z235 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.09□□□□□ -0.47
Gm3543D3Z235 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.09□□□□□ -0.47
Gm3543D3Z235 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.09□□□□□ -0.47
Gm3543D3Z235 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gm3543D3Z235 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.09□□□□□ -0.47
Gm3543D3Z235 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.09□□□□□ -0.47
Gm3543D3Z235 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Gm3543D3Z235 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gm3543D3Z235 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms