Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shank1D3YZU1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Gm15782-201ENSMUST00000121073 445 ntBASIC11.96□□□□□ -0.5
Shank1D3YZU1 Gm16479-201ENSMUST00000121706 932 ntBASIC11.96□□□□□ -0.5
Shank1D3YZU1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Shank1D3YZU1 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Gm22902-201ENSMUST00000158488 302 ntBASIC11.96□□□□□ -0.5
Shank1D3YZU1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.96□□□□□ -0.5
Shank1D3YZU1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Shank1D3YZU1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Shank1D3YZU1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.95□□□□□ -0.5
Shank1D3YZU1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.95□□□□□ -0.5
Shank1D3YZU1 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shank1D3YZU1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.94□□□□□ -0.5
Shank1D3YZU1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms