Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Gm4909-201ENSMUST00000118749 794 ntBASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn7aB1AYL1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Mir5120-201ENSMUST00000175020 78 ntBASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Mir6979-201ENSMUST00000183927 56 ntBASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Gm18212-201ENSMUST00000211678 889 ntBASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn7aB1AYL1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn7aB1AYL1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Scn7aB1AYL1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn7aB1AYL1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC16.83■□□□□ 0.29
Scn7aB1AYL1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn7aB1AYL1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scn7aB1AYL1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn7aB1AYL1 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Gm13813-201ENSMUST00000120998 787 ntBASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Gm14999-201ENSMUST00000121039 624 ntBASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Gm2673-201ENSMUST00000120958 1608 ntBASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn7aB1AYL1 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn7aB1AYL1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn7aB1AYL1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn7aB1AYL1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn7aB1AYL1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn7aB1AYL1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms