Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd3B1AR17 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chd3B1AR17 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd3B1AR17 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chd3B1AR17 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd3B1AR17 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Chd3B1AR17 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Snord83b-201ENSMUST00000104546 94 ntBASIC13.06□□□□□ -0.32
Chd3B1AR17 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.06□□□□□ -0.32
Chd3B1AR17 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Chd3B1AR17 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.06□□□□□ -0.32
Chd3B1AR17 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.06□□□□□ -0.32
Chd3B1AR17 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Chd3B1AR17 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.06□□□□□ -0.32
Chd3B1AR17 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.06□□□□□ -0.32
Chd3B1AR17 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.06□□□□□ -0.32
Chd3B1AR17 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Chd3B1AR17 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.06□□□□□ -0.32
Chd3B1AR17 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Chd3B1AR17 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.06□□□□□ -0.32
Chd3B1AR17 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.06□□□□□ -0.32
Chd3B1AR17 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.06□□□□□ -0.32
Chd3B1AR17 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Chd3B1AR17 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.06□□□□□ -0.32
Chd3B1AR17 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.06□□□□□ -0.32
Chd3B1AR17 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.06□□□□□ -0.32
Chd3B1AR17 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Gm29127-201ENSMUST00000188304 517 ntBASIC13.06□□□□□ -0.32
Chd3B1AR17 Gm28693-202ENSMUST00000190758 331 ntBASIC13.06□□□□□ -0.32
Chd3B1AR17 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.06□□□□□ -0.32
Chd3B1AR17 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Chd3B1AR17 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd3B1AR17 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Chd3B1AR17 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Chd3B1AR17 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Chd3B1AR17 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.05□□□□□ -0.32
Chd3B1AR17 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.05□□□□□ -0.32
Chd3B1AR17 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.05□□□□□ -0.32
Chd3B1AR17 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Chd3B1AR17 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Chd3B1AR17 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Chd3B1AR17 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chd3B1AR17 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.05□□□□□ -0.32
Chd3B1AR17 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chd3B1AR17 Gm22121-201ENSMUST00000175148 54 ntBASIC13.04□□□□□ -0.32
Chd3B1AR17 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.04□□□□□ -0.32
Chd3B1AR17 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.04□□□□□ -0.32
Chd3B1AR17 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.04□□□□□ -0.32
Chd3B1AR17 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd3B1AR17 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd3B1AR17 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chd3B1AR17 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chd3B1AR17 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Chd3B1AR17 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Chd3B1AR17 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Chd3B1AR17 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd3B1AR17 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd3B1AR17 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd3B1AR17 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms