Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.26□□□□□ -0.61
Col6a4A2AX52 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Col6a4A2AX52 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.26□□□□□ -0.61
Col6a4A2AX52 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.26□□□□□ -0.61
Col6a4A2AX52 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Col6a4A2AX52 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Gm21769-201ENSMUST00000211922 111 ntBASIC11.26□□□□□ -0.61
Col6a4A2AX52 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.26□□□□□ -0.61
Col6a4A2AX52 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.26□□□□□ -0.61
Col6a4A2AX52 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.25□□□□□ -0.61
Col6a4A2AX52 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.25□□□□□ -0.61
Col6a4A2AX52 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Gm37986-201ENSMUST00000193285 383 ntBASIC11.25□□□□□ -0.61
Col6a4A2AX52 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.25□□□□□ -0.61
Col6a4A2AX52 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.25□□□□□ -0.61
Col6a4A2AX52 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.24□□□□□ -0.61
Col6a4A2AX52 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.24□□□□□ -0.61
Col6a4A2AX52 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.24□□□□□ -0.61
Col6a4A2AX52 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.24□□□□□ -0.61
Col6a4A2AX52 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms