Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb1A2AQ07 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb1A2AQ07 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb1A2AQ07 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tubb1A2AQ07 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tubb1A2AQ07 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb1A2AQ07 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb1A2AQ07 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tubb1A2AQ07 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb1A2AQ07 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb1A2AQ07 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Gm38144-201ENSMUST00000192790 465 ntBASIC13.67□□□□□ -0.22
Tubb1A2AQ07 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Gm6218-201ENSMUST00000219812 628 ntBASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb1A2AQ07 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tubb1A2AQ07 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubb1A2AQ07 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms