Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Gm12403-201ENSMUST00000121384 959 ntBASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Gm37935-201ENSMUST00000192012 982 ntBASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Gm24447-201ENSMUST00000083977 338 ntBASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ccdc112A0AUP1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc112A0AUP1 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc112A0AUP1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc112A0AUP1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc112A0AUP1 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc112A0AUP1 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc112A0AUP1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc112A0AUP1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms