Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Syt7-205ENSMUST00000224135 1557 ntBASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Mir8117-201ENSMUST00000184773 107 ntBASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm7461-201ENSMUST00000058918 827 ntBASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm13730-201ENSMUST00000121036 1462 ntBASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 CT030684.1-201ENSMUST00000227292 914 ntBASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms