Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav6n-6A0A075B6B2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm44872-201ENSMUST00000207864 420 ntBASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 AC123645.1-201ENSMUST00000228469 605 ntBASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav6n-6A0A075B6B2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm10275-202ENSMUST00000168697 495 ntBASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 AA619741-201ENSMUST00000195095 646 ntBASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 112.6 ms