Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trav18A0A075B656 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.96□□□□□ -0.65
Trav18A0A075B656 Gm4875-201ENSMUST00000118257 786 ntBASIC10.96□□□□□ -0.65
Trav18A0A075B656 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav18A0A075B656 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav18A0A075B656 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav18A0A075B656 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav18A0A075B656 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Trav18A0A075B656 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav18A0A075B656 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav18A0A075B656 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.96□□□□□ -0.66
Trav18A0A075B656 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav18A0A075B656 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav18A0A075B656 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav18A0A075B656 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav18A0A075B656 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.95□□□□□ -0.66
Trav18A0A075B656 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Syt7-205ENSMUST00000224135 1557 ntBASIC10.95□□□□□ -0.66
Trav18A0A075B656 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.95□□□□□ -0.66
Trav18A0A075B656 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.95□□□□□ -0.66
Trav18A0A075B656 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Gm13223-201ENSMUST00000118609 747 ntBASIC10.95□□□□□ -0.66
Trav18A0A075B656 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Gm37935-201ENSMUST00000192012 982 ntBASIC10.95□□□□□ -0.66
Trav18A0A075B656 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Gm18905-201ENSMUST00000205454 928 ntBASIC10.95□□□□□ -0.66
Trav18A0A075B656 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.95□□□□□ -0.66
Trav18A0A075B656 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav18A0A075B656 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms