Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Gm12384-201ENSMUST00000119228 919 ntBASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Gm11793-201ENSMUST00000120433 981 ntBASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Gm25927-201ENSMUST00000175058 117 ntBASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn8aQ9WTU3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Gm42693-201ENSMUST00000196779 631 ntBASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Matn2-206ENSMUST00000228570 2798 ntBASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Scn8aQ9WTU3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Gm10268-201ENSMUST00000085340 555 ntBASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms