Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Mir1894-201ENSMUST00000122802 81 ntBASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Gm27892-201ENSMUST00000185017 106 ntBASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Gm18041-201ENSMUST00000218210 618 ntBASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Gm8598-201ENSMUST00000221184 836 ntBASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.86□□□□□ -0.35
Upk3aQ9JKX8 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Gm10012-201ENSMUST00000078252 192 ntBASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.85□□□□□ -0.35
Upk3aQ9JKX8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Gm44069-201ENSMUST00000204898 506 ntBASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms