Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Gm37795-201ENSMUST00000194216 2459 ntBASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Gm13342-201ENSMUST00000121055 207 ntBASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Gm38341-201ENSMUST00000195357 515 ntBASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Gm38092-201ENSMUST00000195600 653 ntBASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Gm18584-201ENSMUST00000203098 964 ntBASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Gm8228-201ENSMUST00000189949 2192 ntBASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Gm38241-201ENSMUST00000192641 898 ntBASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Gm45865-201ENSMUST00000211815 945 ntBASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Gm18935-201ENSMUST00000212692 664 ntBASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 CT009713.10-202ENSMUST00000225734 696 ntBASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf1Q9EPU4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf1Q9EPU4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cpsf1Q9EPU4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC18.2■□□□□ 0.5
Cpsf1Q9EPU4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms