Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.44□□□□□ -0.42
Cdc40Q9DC48 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Cdc40Q9DC48 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Gm15240-201ENSMUST00000118156 720 ntBASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Gm17150-201ENSMUST00000165577 381 ntBASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Gm27839-201ENSMUST00000184242 106 ntBASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Gm27772-201ENSMUST00000184900 187 ntBASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Gm27892-201ENSMUST00000185017 106 ntBASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.43□□□□□ -0.42
Cdc40Q9DC48 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Gm5035-201ENSMUST00000215581 927 ntBASIC12.43□□□□□ -0.42
Cdc40Q9DC48 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdc40Q9DC48 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.42□□□□□ -0.42
Cdc40Q9DC48 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms