Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Gm17968-201ENSMUST00000194902 784 ntBASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.51□□□□□ -0.25
Sf3a3Q9D554 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3a3Q9D554 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sf3a3Q9D554 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms