Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Gm15427-201ENSMUST00000117288 531 ntBASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.39□□□□□ -0.27
Trim42Q9D2H5 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.39□□□□□ -0.27
Trim42Q9D2H5 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Map1b-203ENSMUST00000223725 2669 ntBASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Gm2810-201ENSMUST00000118681 990 ntBASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Gm14140-201ENSMUST00000119999 995 ntBASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Gm38225-201ENSMUST00000194001 393 ntBASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim42Q9D2H5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms