Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.8□□□□□ -0.36
Shmt2Q9CZN7 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Gm5866-201ENSMUST00000177881 973 ntBASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Gm21854-201ENSMUST00000179901 471 ntBASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shmt2Q9CZN7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Gm6912-201ENSMUST00000117218 544 ntBASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt2Q9CZN7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms