Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15□□□□□ -0.01
Smc1aQ9CU62 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15□□□□□ -0.01
Smc1aQ9CU62 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smc1aQ9CU62 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc1aQ9CU62 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.98□□□□□ -0.01
Smc1aQ9CU62 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Gm27701-201ENSMUST00000184498 110 ntBASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.98□□□□□ -0.01
Smc1aQ9CU62 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smc1aQ9CU62 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smc1aQ9CU62 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms