Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Gm28766-201ENSMUST00000191086 234 ntBASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Gm9908-201ENSMUST00000211534 448 ntBASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Gm45701-201ENSMUST00000212049 235 ntBASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Gm19220-201ENSMUST00000222682 803 ntBASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
Retreg3Q9CQV4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Retreg3Q9CQV4 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Gm15770-201ENSMUST00000117498 584 ntBASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Gm11524-201ENSMUST00000119349 807 ntBASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Gm12485-201ENSMUST00000119641 291 ntBASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 CT030194.1-201ENSMUST00000225507 532 ntBASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Grk6-205ENSMUST00000224653 2976 ntBASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retreg3Q9CQV4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retreg3Q9CQV4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retreg3Q9CQV4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retreg3Q9CQV4 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.63□□□□□ -0.23
Retreg3Q9CQV4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retreg3Q9CQV4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retreg3Q9CQV4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.63□□□□□ -0.23
Retreg3Q9CQV4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Retreg3Q9CQV4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retreg3Q9CQV4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retreg3Q9CQV4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retreg3Q9CQV4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.63□□□□□ -0.23
Retreg3Q9CQV4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.63□□□□□ -0.23
Retreg3Q9CQV4 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.63□□□□□ -0.23
Retreg3Q9CQV4 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms