Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rpa3Q9CQ71 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Gm18018-201ENSMUST00000198273 408 ntBASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa3Q9CQ71 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rpa3Q9CQ71 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa3Q9CQ71 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa3Q9CQ71 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms