Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Gm15693-201ENSMUST00000120470 637 ntBASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Gm26308-201ENSMUST00000157768 69 ntBASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Gm25144-201ENSMUST00000179561 110 ntBASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Gm25352-201ENSMUST00000179815 110 ntBASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Gm27430-201ENSMUST00000184585 107 ntBASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Gm44333-201ENSMUST00000197168 107 ntBASIC12.67□□□□□ -0.38
Ska1Q9CPV1 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ska1Q9CPV1 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ska1Q9CPV1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Mir698-201ENSMUST00000102164 109 ntBASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Gm28630-201ENSMUST00000187806 498 ntBASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Gm33320-201ENSMUST00000192232 530 ntBASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms