Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim33Q99PP7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim33Q99PP7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim33Q99PP7 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.32□□□□□ -0.28
Trim33Q99PP7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Gm28631-201ENSMUST00000190740 334 ntBASIC13.32□□□□□ -0.28
Trim33Q99PP7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim33Q99PP7 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.32□□□□□ -0.28
Trim33Q99PP7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim33Q99PP7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.31□□□□□ -0.28
Trim33Q99PP7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Grk6-205ENSMUST00000224653 2976 ntBASIC13.31□□□□□ -0.28
Trim33Q99PP7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.31□□□□□ -0.28
Trim33Q99PP7 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.31□□□□□ -0.28
Trim33Q99PP7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.31□□□□□ -0.28
Trim33Q99PP7 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.31□□□□□ -0.28
Trim33Q99PP7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Gm19220-201ENSMUST00000222682 803 ntBASIC13.31□□□□□ -0.28
Trim33Q99PP7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.31□□□□□ -0.28
Trim33Q99PP7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim33Q99PP7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.3□□□□□ -0.28
Trim33Q99PP7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim33Q99PP7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms