Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Gm9466-201ENSMUST00000218144 2246 ntBASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 CT010486.3-201ENSMUST00000224555 811 ntBASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gtf2a1Q99PM3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Gm15678-201ENSMUST00000117573 960 ntBASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gtf2a1Q99PM3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gtf2a1Q99PM3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gtf2a1Q99PM3 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gtf2a1Q99PM3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gtf2a1Q99PM3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gtf2a1Q99PM3 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gtf2a1Q99PM3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Gtf2a1Q99PM3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gtf2a1Q99PM3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.59□□□□□ -0.07
Gtf2a1Q99PM3 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gtf2a1Q99PM3 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms