Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Gm24990-201ENSMUST00000157406 323 ntBASIC14.04□□□□□ -0.16
Clp1Q99LI9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.04□□□□□ -0.16
Clp1Q99LI9 Gm13097-201ENSMUST00000210722 397 ntBASIC14.04□□□□□ -0.16
Clp1Q99LI9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.04□□□□□ -0.16
Clp1Q99LI9 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.04□□□□□ -0.16
Clp1Q99LI9 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.04□□□□□ -0.16
Clp1Q99LI9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.04□□□□□ -0.16
Clp1Q99LI9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.03□□□□□ -0.16
Clp1Q99LI9 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Gm26956-201ENSMUST00000182176 986 ntBASIC14.03□□□□□ -0.16
Clp1Q99LI9 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.03□□□□□ -0.16
Clp1Q99LI9 Gm31256-201ENSMUST00000194705 506 ntBASIC14.03□□□□□ -0.16
Clp1Q99LI9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clp1Q99LI9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clp1Q99LI9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clp1Q99LI9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.02□□□□□ -0.16
Clp1Q99LI9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clp1Q99LI9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clp1Q99LI9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Clp1Q99LI9 Snord83b-201ENSMUST00000104546 94 ntBASIC14.02□□□□□ -0.17
Clp1Q99LI9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms