Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.42■□□□□ 0.22
RtcbQ99LF4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Gm7857-201ENSMUST00000117957 358 ntBASIC16.42■□□□□ 0.22
RtcbQ99LF4 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RtcbQ99LF4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC16.41■□□□□ 0.22
RtcbQ99LF4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Gm25214-201ENSMUST00000104573 129 ntBASIC16.41■□□□□ 0.22
RtcbQ99LF4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Gm2546-201ENSMUST00000182630 991 ntBASIC16.41■□□□□ 0.22
RtcbQ99LF4 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Mir6927-201ENSMUST00000184494 71 ntBASIC16.41■□□□□ 0.22
RtcbQ99LF4 Gm34767-201ENSMUST00000191813 1062 ntBASIC16.41■□□□□ 0.22
RtcbQ99LF4 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Gm4366-201ENSMUST00000201488 1342 ntBASIC16.41■□□□□ 0.22
RtcbQ99LF4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RtcbQ99LF4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Gm11930-201ENSMUST00000117788 190 ntBASIC16.4■□□□□ 0.22
RtcbQ99LF4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Gm9004-201ENSMUST00000218739 1222 ntBASIC16.4■□□□□ 0.22
RtcbQ99LF4 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.4■□□□□ 0.22
RtcbQ99LF4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Gm38157-201ENSMUST00000194178 1698 ntBASIC16.4■□□□□ 0.22
RtcbQ99LF4 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RtcbQ99LF4 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RtcbQ99LF4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
RtcbQ99LF4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RtcbQ99LF4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RtcbQ99LF4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RtcbQ99LF4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.39■□□□□ 0.21
RtcbQ99LF4 Gm5846-201ENSMUST00000193146 1414 ntBASIC16.39■□□□□ 0.21
RtcbQ99LF4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RtcbQ99LF4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RtcbQ99LF4 Snord83b-201ENSMUST00000104546 94 ntBASIC16.39■□□□□ 0.21
RtcbQ99LF4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RtcbQ99LF4 Gm13665-201ENSMUST00000120830 528 ntBASIC16.39■□□□□ 0.21
RtcbQ99LF4 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC16.39■□□□□ 0.21
RtcbQ99LF4 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms