Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.37■□□□□ 0.05
Rfc4Q99J62 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.37■□□□□ 0.05
Rfc4Q99J62 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Gm7809-201ENSMUST00000153199 742 ntBASIC15.37■□□□□ 0.05
Rfc4Q99J62 Gm25668-201ENSMUST00000157700 129 ntBASIC15.37■□□□□ 0.05
Rfc4Q99J62 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.37■□□□□ 0.05
Rfc4Q99J62 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.37■□□□□ 0.05
Rfc4Q99J62 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rfc4Q99J62 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Gm17376-201ENSMUST00000166016 84 ntBASIC15.36■□□□□ 0.05
Rfc4Q99J62 Gm20482-202ENSMUST00000174729 825 ntBASIC15.36■□□□□ 0.05
Rfc4Q99J62 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.36■□□□□ 0.05
Rfc4Q99J62 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Gm6082-201ENSMUST00000215204 454 ntBASIC15.36■□□□□ 0.05
Rfc4Q99J62 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.36■□□□□ 0.05
Rfc4Q99J62 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.36■□□□□ 0.05
Rfc4Q99J62 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc4Q99J62 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Mir5132-201ENSMUST00000175166 71 ntBASIC15.35■□□□□ 0.05
Rfc4Q99J62 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.35■□□□□ 0.05
Rfc4Q99J62 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.35■□□□□ 0.05
Rfc4Q99J62 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.35■□□□□ 0.05
Rfc4Q99J62 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.35■□□□□ 0.05
Rfc4Q99J62 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.35■□□□□ 0.05
Rfc4Q99J62 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rfc4Q99J62 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms