Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Gm15371-201ENSMUST00000117057 784 ntBASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Gm9908-201ENSMUST00000211534 448 ntBASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdha3Q91Y16 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Gm43134-201ENSMUST00000199434 1886 ntBASIC14□□□□□ -0.17
Pcdha3Q91Y16 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14□□□□□ -0.17
Pcdha3Q91Y16 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Gm5161-201ENSMUST00000075243 853 ntBASIC14□□□□□ -0.17
Pcdha3Q91Y16 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Gm37644-201ENSMUST00000192190 2270 ntBASIC14□□□□□ -0.17
Pcdha3Q91Y16 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14□□□□□ -0.17
Pcdha3Q91Y16 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Gm4782-201ENSMUST00000168705 2046 ntBASIC14□□□□□ -0.17
Pcdha3Q91Y16 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdha3Q91Y16 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Gm15376-201ENSMUST00000122258 783 ntBASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Gm7653-201ENSMUST00000214567 508 ntBASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdha3Q91Y16 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms