Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb20Q91XZ9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb20Q91XZ9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb20Q91XZ9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb20Q91XZ9 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb20Q91XZ9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb20Q91XZ9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb20Q91XZ9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Gm15240-201ENSMUST00000118156 720 ntBASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Gm29640-201ENSMUST00000187972 278 ntBASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Gm37917-201ENSMUST00000194711 392 ntBASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Gm37724-201ENSMUST00000195240 1221 ntBASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Gm5279-201ENSMUST00000199575 745 ntBASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Gm15394-201ENSMUST00000119656 1308 ntBASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb20Q91XZ9 Gm42462-201ENSMUST00000196543 1363 ntBASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Gm17711-201ENSMUST00000172028 237 ntBASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Mir3473a-201ENSMUST00000175011 78 ntBASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Gm20689-201ENSMUST00000176033 279 ntBASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Gm20914-202ENSMUST00000188887 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Gm19572-201ENSMUST00000214326 338 ntBASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Cntnap2-201ENSMUST00000060839 1540 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb20Q91XZ9 Gm7647-201ENSMUST00000200996 1389 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms