Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb4Q91XZ6 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb4Q91XZ6 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb4Q91XZ6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb4Q91XZ6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb4Q91XZ6 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb4Q91XZ6 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.33□□□□□ -0.27
Pcdhb4Q91XZ6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb4Q91XZ6 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Gm4875-201ENSMUST00000118257 786 ntBASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb4Q91XZ6 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb4Q91XZ6 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.3□□□□□ -0.28
Pcdhb4Q91XZ6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms