Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga11Q91XY8 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Gm15770-201ENSMUST00000117498 584 ntBASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Gm5866-201ENSMUST00000177881 973 ntBASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga11Q91XY8 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Gm15240-201ENSMUST00000118156 720 ntBASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga11Q91XY8 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga11Q91XY8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms