Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tram1Q91V04 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tram1Q91V04 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tram1Q91V04 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tram1Q91V04 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Tram1Q91V04 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tram1Q91V04 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tram1Q91V04 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tram1Q91V04 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.5□□□□□ -0.57
Tram1Q91V04 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.5□□□□□ -0.57
Tram1Q91V04 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.5□□□□□ -0.57
Tram1Q91V04 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Gm15427-201ENSMUST00000117288 531 ntBASIC11.5□□□□□ -0.57
Tram1Q91V04 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.5□□□□□ -0.57
Tram1Q91V04 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.5□□□□□ -0.57
Tram1Q91V04 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Mir7221-201ENSMUST00000184009 72 ntBASIC11.5□□□□□ -0.57
Tram1Q91V04 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.5□□□□□ -0.57
Tram1Q91V04 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.5□□□□□ -0.57
Tram1Q91V04 Mir497b-201ENSMUST00000093601 125 ntBASIC11.5□□□□□ -0.57
Tram1Q91V04 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Tram1Q91V04 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tram1Q91V04 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Tram1Q91V04 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.49□□□□□ -0.57
Tram1Q91V04 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.49□□□□□ -0.57
Tram1Q91V04 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Tram1Q91V04 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.49□□□□□ -0.57
Tram1Q91V04 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.49□□□□□ -0.57
Tram1Q91V04 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Tram1Q91V04 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Tram1Q91V04 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.49□□□□□ -0.57
Tram1Q91V04 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Tram1Q91V04 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tram1Q91V04 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Tram1Q91V04 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Tram1Q91V04 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.48□□□□□ -0.57
Tram1Q91V04 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.48□□□□□ -0.57
Tram1Q91V04 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Tram1Q91V04 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.48□□□□□ -0.57
Tram1Q91V04 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Gm17968-201ENSMUST00000194902 784 ntBASIC11.48□□□□□ -0.57
Tram1Q91V04 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.48□□□□□ -0.57
Tram1Q91V04 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.48□□□□□ -0.57
Tram1Q91V04 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms