Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.24□□□□□ -0.13
Smg8Q8VE18 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smg8Q8VE18 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.24□□□□□ -0.13
Smg8Q8VE18 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.24□□□□□ -0.13
Smg8Q8VE18 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.24□□□□□ -0.13
Smg8Q8VE18 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.24□□□□□ -0.13
Smg8Q8VE18 Gm7399-201ENSMUST00000032395 858 ntBASIC14.24□□□□□ -0.13
Smg8Q8VE18 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smg8Q8VE18 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.23□□□□□ -0.13
Smg8Q8VE18 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Gm25261-201ENSMUST00000157416 134 ntBASIC14.23□□□□□ -0.13
Smg8Q8VE18 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Gm38002-201ENSMUST00000193255 180 ntBASIC14.23□□□□□ -0.13
Smg8Q8VE18 Gm37008-201ENSMUST00000195712 319 ntBASIC14.23□□□□□ -0.13
Smg8Q8VE18 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smg8Q8VE18 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Smg8Q8VE18 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.22□□□□□ -0.13
Smg8Q8VE18 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Smg8Q8VE18 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.22□□□□□ -0.13
Smg8Q8VE18 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smg8Q8VE18 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms