Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.79□□□□□ -0.2
Rprd1aQ8VDS4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rprd1aQ8VDS4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rprd1aQ8VDS4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rprd1aQ8VDS4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Rprd1aQ8VDS4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rprd1aQ8VDS4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rprd1aQ8VDS4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rprd1aQ8VDS4 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.79□□□□□ -0.2
Rprd1aQ8VDS4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rprd1aQ8VDS4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rprd1aQ8VDS4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rprd1aQ8VDS4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rprd1aQ8VDS4 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rprd1aQ8VDS4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Gm27892-201ENSMUST00000185017 106 ntBASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rprd1aQ8VDS4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rprd1aQ8VDS4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rprd1aQ8VDS4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rprd1aQ8VDS4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rprd1aQ8VDS4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rprd1aQ8VDS4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rprd1aQ8VDS4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Gm6244-201ENSMUST00000178732 841 ntBASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Gm5186-201ENSMUST00000218781 920 ntBASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Gm26315-201ENSMUST00000083890 321 ntBASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Rprd1aQ8VDS4 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms