Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Q8VDP2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Q8VDP2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.03□□□□□ -0.32
Q8VDP2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Q8VDP2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Q8VDP2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Q8VDP2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Q8VDP2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Q8VDP2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Q8VDP2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Q8VDP2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Q8VDP2 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Q8VDP2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Q8VDP2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Q8VDP2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.02□□□□□ -0.32
Q8VDP2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.02□□□□□ -0.32
Q8VDP2 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Q8VDP2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Q8VDP2 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Q8VDP2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Q8VDP2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.02□□□□□ -0.33
Q8VDP2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.02□□□□□ -0.33
Q8VDP2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.02□□□□□ -0.33
Q8VDP2 Gm10060-201ENSMUST00000212002 111 ntBASIC13.02□□□□□ -0.33
Q8VDP2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Q8VDP2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Q8VDP2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.02□□□□□ -0.33
Q8VDP2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Q8VDP2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Q8VDP2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.01□□□□□ -0.33
Q8VDP2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Q8VDP2 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Q8VDP2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Q8VDP2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Q8VDP2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.01□□□□□ -0.33
Q8VDP2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.01□□□□□ -0.33
Q8VDP2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.01□□□□□ -0.33
Q8VDP2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Q8VDP2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.01□□□□□ -0.33
Q8VDP2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.01□□□□□ -0.33
Q8VDP2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.01□□□□□ -0.33
Q8VDP2 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.01□□□□□ -0.33
Q8VDP2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Q8VDP2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q8VDP2 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q8VDP2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Q8VDP2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Q8VDP2 Gm44292-201ENSMUST00000205194 2364 ntBASIC13□□□□□ -0.33
Q8VDP2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Q8VDP2 Btrc-209ENSMUST00000224478 2194 ntBASIC13□□□□□ -0.33
Q8VDP2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Q8VDP2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Q8VDP2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q8VDP2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13□□□□□ -0.33
Q8VDP2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13□□□□□ -0.33
Q8VDP2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13□□□□□ -0.33
Q8VDP2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q8VDP2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Q8VDP2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13□□□□□ -0.33
Q8VDP2 Gm12497-201ENSMUST00000138778 237 ntBASIC13□□□□□ -0.33
Q8VDP2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Q8VDP2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13□□□□□ -0.33
Q8VDP2 Mir5131-201ENSMUST00000175426 93 ntBASIC13□□□□□ -0.33
Q8VDP2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Q8VDP2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms