Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cd109Q8R422 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cd109Q8R422 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cd109Q8R422 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Cd109Q8R422 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cd109Q8R422 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.59
Cd109Q8R422 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cd109Q8R422 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Cd109Q8R422 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cd109Q8R422 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC18.76■□□□□ 0.59
Cd109Q8R422 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd109Q8R422 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd109Q8R422 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd109Q8R422 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC18.76■□□□□ 0.59
Cd109Q8R422 Gm25668-201ENSMUST00000157700 129 ntBASIC18.76■□□□□ 0.59
Cd109Q8R422 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cd109Q8R422 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC18.76■□□□□ 0.59
Cd109Q8R422 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd109Q8R422 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC18.76■□□□□ 0.59
Cd109Q8R422 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd109Q8R422 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd109Q8R422 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd109Q8R422 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC18.76■□□□□ 0.59
Cd109Q8R422 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd109Q8R422 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cd109Q8R422 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC18.76■□□□□ 0.59
Cd109Q8R422 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd109Q8R422 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd109Q8R422 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd109Q8R422 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd109Q8R422 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd109Q8R422 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cd109Q8R422 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC18.75■□□□□ 0.59
Cd109Q8R422 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Gm2383-201ENSMUST00000181461 807 ntBASIC18.75■□□□□ 0.59
Cd109Q8R422 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cd109Q8R422 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.75■□□□□ 0.59
Cd109Q8R422 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cd109Q8R422 Gm2606-201ENSMUST00000100754 1002 ntBASIC18.74■□□□□ 0.59
Cd109Q8R422 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC18.74■□□□□ 0.59
Cd109Q8R422 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC18.74■□□□□ 0.59
Cd109Q8R422 Gm7293-201ENSMUST00000216682 1007 ntBASIC18.74■□□□□ 0.59
Cd109Q8R422 Gm9004-201ENSMUST00000218739 1222 ntBASIC18.74■□□□□ 0.59
Cd109Q8R422 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cd109Q8R422 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.74■□□□□ 0.59
Cd109Q8R422 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cd109Q8R422 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 AC167669.2-201ENSMUST00000224417 1620 ntBASIC18.74■□□□□ 0.59
Cd109Q8R422 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Cd109Q8R422 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cd109Q8R422 Gm11531-201ENSMUST00000117614 555 ntBASIC18.74■□□□□ 0.59
Cd109Q8R422 Gm13875-201ENSMUST00000120162 282 ntBASIC18.74■□□□□ 0.59
Cd109Q8R422 Gm14726-201ENSMUST00000120623 896 ntBASIC18.74■□□□□ 0.59
Cd109Q8R422 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Cd109Q8R422 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC18.74■□□□□ 0.59
Cd109Q8R422 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Cd109Q8R422 Rn7s1-201ENSMUST00000174924 300 ntBASIC18.74■□□□□ 0.59
Cd109Q8R422 Rn7s2-201ENSMUST00000175032 300 ntBASIC18.74■□□□□ 0.59
Cd109Q8R422 Gm26461-201ENSMUST00000175064 290 ntBASIC18.74■□□□□ 0.59
Cd109Q8R422 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Gm38092-201ENSMUST00000195600 653 ntBASIC18.74■□□□□ 0.59
Cd109Q8R422 Gm37466-201ENSMUST00000195692 652 ntBASIC18.74■□□□□ 0.59
Cd109Q8R422 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC18.74■□□□□ 0.59
Cd109Q8R422 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC18.74■□□□□ 0.59
Cd109Q8R422 Gm18916-201ENSMUST00000198264 1246 ntBASIC18.74■□□□□ 0.59
Cd109Q8R422 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd109Q8R422 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms