Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Gm18041-201ENSMUST00000218210 618 ntBASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim29Q8R2Q0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Gm15376-201ENSMUST00000122258 783 ntBASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim29Q8R2Q0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Gm12403-201ENSMUST00000121384 959 ntBASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Gm27437-201ENSMUST00000183429 107 ntBASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim29Q8R2Q0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim29Q8R2Q0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim29Q8R2Q0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim29Q8R2Q0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim29Q8R2Q0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim29Q8R2Q0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim29Q8R2Q0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Trim29Q8R2Q0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim29Q8R2Q0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
Trim29Q8R2Q0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms