Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Gm15897-201ENSMUST00000117770 1486 ntBASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Gm13297-201ENSMUST00000120205 934 ntBASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Mospd4-201ENSMUST00000180618 576 ntBASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Gm6621-201ENSMUST00000193251 772 ntBASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Gm18056-201ENSMUST00000207670 568 ntBASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Gm18061-201ENSMUST00000208350 562 ntBASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Gm18063-201ENSMUST00000208529 568 ntBASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Gm18052-201ENSMUST00000208750 559 ntBASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Gm6458-201ENSMUST00000211573 635 ntBASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Chmp7Q8R1T1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Gm15236-201ENSMUST00000117309 379 ntBASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Gm4986-201ENSMUST00000119731 549 ntBASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Gm7118-201ENSMUST00000200167 1003 ntBASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp7Q8R1T1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp7Q8R1T1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp7Q8R1T1 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp7Q8R1T1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp7Q8R1T1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp7Q8R1T1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp7Q8R1T1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp7Q8R1T1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp7Q8R1T1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp7Q8R1T1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.02■□□□□ 0.31
Chmp7Q8R1T1 Gm3756-201ENSMUST00000169182 1355 ntBASIC17.02■□□□□ 0.31
Chmp7Q8R1T1 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.02■□□□□ 0.31
Chmp7Q8R1T1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Chmp7Q8R1T1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Gm45779-201ENSMUST00000212189 4064 ntBASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Gm37259-201ENSMUST00000193903 849 ntBASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms