Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Atf7Q8R0S1 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf7Q8R0S1 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.8■□□□□ 0.12
Atf7Q8R0S1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf7Q8R0S1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf7Q8R0S1 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.8■□□□□ 0.12
Atf7Q8R0S1 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf7Q8R0S1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Atf7Q8R0S1 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Mir7654-201ENSMUST00000185082 70 ntBASIC15.79■□□□□ 0.12
Atf7Q8R0S1 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Gm26315-201ENSMUST00000083890 321 ntBASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf7Q8R0S1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Gm5866-201ENSMUST00000177881 973 ntBASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atf7Q8R0S1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Gm15371-201ENSMUST00000117057 784 ntBASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Mir6392-201ENSMUST00000184924 108 ntBASIC15.77■□□□□ 0.12
Atf7Q8R0S1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Atf7Q8R0S1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Atf7Q8R0S1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Atf7Q8R0S1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.77■□□□□ 0.11
Atf7Q8R0S1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Atf7Q8R0S1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Atf7Q8R0S1 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.77■□□□□ 0.11
Atf7Q8R0S1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Atf7Q8R0S1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Atf7Q8R0S1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Atf7Q8R0S1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Atf7Q8R0S1 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms