Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.63□□□□□ -0.39
Clrn1Q8K445 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.63□□□□□ -0.39
Clrn1Q8K445 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.63□□□□□ -0.39
Clrn1Q8K445 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.63□□□□□ -0.39
Clrn1Q8K445 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.63□□□□□ -0.39
Clrn1Q8K445 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn1Q8K445 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.62□□□□□ -0.39
Clrn1Q8K445 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Gm42550-201ENSMUST00000201553 960 ntBASIC12.62□□□□□ -0.39
Clrn1Q8K445 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Grk6-205ENSMUST00000224653 2976 ntBASIC12.62□□□□□ -0.39
Clrn1Q8K445 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Clrn1Q8K445 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn1Q8K445 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.61□□□□□ -0.39
Clrn1Q8K445 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.61□□□□□ -0.39
Clrn1Q8K445 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.61□□□□□ -0.39
Clrn1Q8K445 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.61□□□□□ -0.39
Clrn1Q8K445 Gm29608-201ENSMUST00000190444 463 ntBASIC12.61□□□□□ -0.39
Clrn1Q8K445 Gm38144-201ENSMUST00000192790 465 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms