Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.07■□□□□ 0
Syne4Q8CII8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Syne4Q8CII8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Syne4Q8CII8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.06■□□□□ 0
Syne4Q8CII8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.06■□□□□ 0
Syne4Q8CII8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Syne4Q8CII8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 Gm4909-201ENSMUST00000118749 794 ntBASIC15.06■□□□□ 0
Syne4Q8CII8 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Syne4Q8CII8 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.06■□□□□ 0
Syne4Q8CII8 Mir5120-201ENSMUST00000175020 78 ntBASIC15.06■□□□□ 0
Syne4Q8CII8 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.06■□□□□ 0
Syne4Q8CII8 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.06■□□□□ 0
Syne4Q8CII8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Syne4Q8CII8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.06■□□□□ 0
Syne4Q8CII8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Syne4Q8CII8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Syne4Q8CII8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Syne4Q8CII8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.05■□□□□ 0
Syne4Q8CII8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.05■□□□□ 0
Syne4Q8CII8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.05■□□□□ 0
Syne4Q8CII8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.05■□□□□ -0
Syne4Q8CII8 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Syne4Q8CII8 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC15.05■□□□□ -0
Syne4Q8CII8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Syne4Q8CII8 Gm14277-201ENSMUST00000121195 360 ntBASIC15.05■□□□□ -0
Syne4Q8CII8 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Syne4Q8CII8 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.05■□□□□ -0
Syne4Q8CII8 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Gm13097-201ENSMUST00000210722 397 ntBASIC15.05■□□□□ -0
Syne4Q8CII8 Gm32025-201ENSMUST00000217960 307 ntBASIC15.05■□□□□ -0
Syne4Q8CII8 Abhd11os-203ENSMUST00000222613 363 ntBASIC15.05■□□□□ -0
Syne4Q8CII8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Syne4Q8CII8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.05■□□□□ -0
Syne4Q8CII8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Syne4Q8CII8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Syne4Q8CII8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Syne4Q8CII8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Syne4Q8CII8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.04■□□□□ -0
Syne4Q8CII8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC15.04■□□□□ -0
Syne4Q8CII8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Gm23270-201ENSMUST00000104055 131 ntBASIC15.04■□□□□ -0
Syne4Q8CII8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.04■□□□□ -0
Syne4Q8CII8 Gm11439-201ENSMUST00000118598 409 ntBASIC15.04■□□□□ -0
Syne4Q8CII8 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC15.04■□□□□ -0
Syne4Q8CII8 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC15.04■□□□□ -0
Syne4Q8CII8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.04■□□□□ -0
Syne4Q8CII8 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Syne4Q8CII8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Syne4Q8CII8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.04■□□□□ -0
Syne4Q8CII8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syne4Q8CII8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syne4Q8CII8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms