Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Gm43463-201ENSMUST00000195967 1803 ntBASIC16.54■□□□□ 0.24
Smc5Q8CG46 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Gm23935-201ENSMUST00000102303 57 ntBASIC16.54■□□□□ 0.24
Smc5Q8CG46 Gm24270-201ENSMUST00000102326 57 ntBASIC16.54■□□□□ 0.24
Smc5Q8CG46 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Gm24245-201ENSMUST00000157318 57 ntBASIC16.54■□□□□ 0.24
Smc5Q8CG46 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.54■□□□□ 0.24
Smc5Q8CG46 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smc5Q8CG46 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Gm42480-201ENSMUST00000198434 2595 ntBASIC16.53■□□□□ 0.24
Smc5Q8CG46 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Gm17837-201ENSMUST00000186435 985 ntBASIC16.53■□□□□ 0.24
Smc5Q8CG46 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.53■□□□□ 0.24
Smc5Q8CG46 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.53■□□□□ 0.24
Smc5Q8CG46 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smc5Q8CG46 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Smc5Q8CG46 Gm44241-201ENSMUST00000203230 1662 ntBASIC16.53■□□□□ 0.24
Smc5Q8CG46 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC16.52■□□□□ 0.24
Smc5Q8CG46 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 Gm3052-202ENSMUST00000188254 2224 ntBASIC16.52■□□□□ 0.24
Smc5Q8CG46 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.52■□□□□ 0.24
Smc5Q8CG46 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Smc5Q8CG46 Gm27702-201ENSMUST00000184512 56 ntBASIC16.52■□□□□ 0.24
Smc5Q8CG46 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.52■□□□□ 0.24
Smc5Q8CG46 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smc5Q8CG46 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC16.52■□□□□ 0.23
Smc5Q8CG46 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc5Q8CG46 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc5Q8CG46 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc5Q8CG46 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smc5Q8CG46 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.52■□□□□ 0.23
Smc5Q8CG46 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Smc5Q8CG46 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.51■□□□□ 0.23
Smc5Q8CG46 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms