Protein–RNA interactions for Protein: Q8CFI2

Cdc34, Ubiquitin-conjugating enzyme E2 R1, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc34Q8CFI2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Gm27628-201ENSMUST00000184911 107 ntBASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Gm15590-201ENSMUST00000078419 552 ntBASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdc34Q8CFI2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Mir874-201ENSMUST00000104769 76 ntBASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdc34Q8CFI2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Gm28033-201ENSMUST00000184224 96 ntBASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Mir7071-201ENSMUST00000184847 69 ntBASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 AA619741-201ENSMUST00000195095 646 ntBASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 AC161829.1-201ENSMUST00000220298 281 ntBASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdc34Q8CFI2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms