Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Vcpip1Q8CDG3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Gm7488-201ENSMUST00000117148 684 ntBASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Gm15678-201ENSMUST00000117573 960 ntBASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Gm27772-201ENSMUST00000184900 187 ntBASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Vcpip1Q8CDG3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Vcpip1Q8CDG3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vcpip1Q8CDG3 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.38□□□□□ -0.11
Vcpip1Q8CDG3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms