Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC20.23■□□□□ 0.83
Pabpn1Q8CCS6 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Gm44981-201ENSMUST00000205549 1943 ntBASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Gm13809-201ENSMUST00000117921 597 ntBASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Gm11979-201ENSMUST00000119629 743 ntBASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Gm12783-201ENSMUST00000121425 397 ntBASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1Q8CCS6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Gm45527-201ENSMUST00000211052 774 ntBASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Gm17827-201ENSMUST00000211825 742 ntBASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 CT025553.1-201ENSMUST00000226292 299 ntBASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Gm6430-201ENSMUST00000054664 1248 ntBASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1Q8CCS6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Gm11956-201ENSMUST00000119525 512 ntBASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Gm44980-201ENSMUST00000205826 314 ntBASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Gm7959-201ENSMUST00000221823 1078 ntBASIC20.2■□□□□ 0.82
Pabpn1Q8CCS6 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms