Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Mospd4-201ENSMUST00000180618 576 ntBASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Gm37042-201ENSMUST00000193816 581 ntBASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a6Q8C6K9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Gm14726-201ENSMUST00000120623 896 ntBASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Gm45186-201ENSMUST00000206874 478 ntBASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a6Q8C6K9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Gm29787-201ENSMUST00000222129 849 ntBASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Mir6927-201ENSMUST00000184494 71 ntBASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a6Q8C6K9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Gm4768-201ENSMUST00000206199 686 ntBASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Gm5781-201ENSMUST00000219792 443 ntBASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms