Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp44Q8C2S0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Usp44Q8C2S0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Usp44Q8C2S0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Gm6244-201ENSMUST00000178732 841 ntBASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp44Q8C2S0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Proscos-202ENSMUST00000178990 666 ntBASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Usp44Q8C2S0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Gm44069-201ENSMUST00000204898 506 ntBASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Usp44Q8C2S0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Usp44Q8C2S0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.61■□□□□ 0.09
Usp44Q8C2S0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Usp44Q8C2S0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Usp44Q8C2S0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Usp44Q8C2S0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.61■□□□□ 0.09
Usp44Q8C2S0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Usp44Q8C2S0 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.61■□□□□ 0.09
Usp44Q8C2S0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms