Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd9Q8BYH8 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd9Q8BYH8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd9Q8BYH8 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Chd9Q8BYH8 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC10.4□□□□□ -0.74
Chd9Q8BYH8 Gm13286-201ENSMUST00000117750 537 ntBASIC10.4□□□□□ -0.74
Chd9Q8BYH8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd9Q8BYH8 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.4□□□□□ -0.74
Chd9Q8BYH8 Gm16372-201ENSMUST00000073088 450 ntBASIC10.4□□□□□ -0.74
Chd9Q8BYH8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Chd9Q8BYH8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Chd9Q8BYH8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd9Q8BYH8 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.4□□□□□ -0.75
Chd9Q8BYH8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd9Q8BYH8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd9Q8BYH8 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.4□□□□□ -0.75
Chd9Q8BYH8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Chd9Q8BYH8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd9Q8BYH8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd9Q8BYH8 Gm8885-201ENSMUST00000189382 598 ntBASIC10.4□□□□□ -0.75
Chd9Q8BYH8 Gm8913-201ENSMUST00000209491 641 ntBASIC10.4□□□□□ -0.75
Chd9Q8BYH8 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd9Q8BYH8 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Chd9Q8BYH8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Chd9Q8BYH8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd9Q8BYH8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Defa-ps17-201ENSMUST00000121849 171 ntBASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Gm9136-201ENSMUST00000193368 454 ntBASIC10.39□□□□□ -0.75
Chd9Q8BYH8 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Gm14274-201ENSMUST00000117182 615 ntBASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Gm11637-201ENSMUST00000120601 592 ntBASIC10.39□□□□□ -0.75
Chd9Q8BYH8 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.39□□□□□ -0.75
Chd9Q8BYH8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC10.39□□□□□ -0.75
Chd9Q8BYH8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Gm45433-201ENSMUST00000209386 247 ntBASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd9Q8BYH8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms