Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Gm10766-202ENSMUST00000194123 606 ntBASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Mir497b-201ENSMUST00000093601 125 ntBASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trerf1Q8BXJ2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Gm29741-201ENSMUST00000192667 421 ntBASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms