Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm12203-201ENSMUST00000118235 598 ntBASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm12209-201ENSMUST00000120089 596 ntBASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm27331-201ENSMUST00000183705 60 ntBASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm43818-201ENSMUST00000200605 466 ntBASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm29705-201ENSMUST00000212598 474 ntBASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk5rap1Q8BTW8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap1Q8BTW8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Cdk5rap1Q8BTW8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap1Q8BTW8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap1Q8BTW8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap1Q8BTW8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap1Q8BTW8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Cdk5rap1Q8BTW8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap1Q8BTW8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap1Q8BTW8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cdk5rap1Q8BTW8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap1Q8BTW8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cdk5rap1Q8BTW8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk5rap1Q8BTW8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Acot6-202ENSMUST00000222921 3622 ntBASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm45841-201ENSMUST00000207700 164 ntBASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm40466-201ENSMUST00000212174 422 ntBASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk5rap1Q8BTW8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm12957-201ENSMUST00000117835 377 ntBASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Gm12384-201ENSMUST00000119228 919 ntBASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdk5rap1Q8BTW8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms